[1]WITZE E S, OLD W M, RESING K A, et al. Mapping protein post-translational modifications with mass spectrometry[J]. Nature Methods, 2007,4(10): 798-806.[2]KANNICHT C. Post-translational modifications of proteins: Tools for functional proteomics[C]// Methods in Molecular Biology. 2nd ed. Totowa: Humana Press, 2008.[3]MANN M, JENSEN O N. Proteomic analysis of post-translational modifications[J]. Nature Biotechnology, 2003,21: 255-261.[4]ENG J K, McCORMACK A L, YATES J R, Ⅲ. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database[J]. Journal of the American Society for Mass Spectrometry, 1994, 5(11): 976-989.[5]INGRELL C R, MILLER M L, JENSEN O N, et al. NetPhosYeast: prediction of protein phosphorylation sites in yeast[J]. Bioinformatics, 2007, 23(7): 895-897.[6]PEVZNER P A, DANCIK V, TANG C L. Mutation-tolerant protein identification by mass spectrometry[J]. Journal of Computational Biology, 2000, 7(6): 777-787.[7]LIU CHUNMEI, YAN BO, SONG YINGLEI, et al.Peptide sequence tag-based blind identification of post-translational modifications with point process model[J]. Bioinformatics, 2006, 22(14):e307-e313[8]MANN M, WILM M. Error-tolerant identification of peptides in sequence databases by peptide sequence tags[J]. Analytical Chemistry, 1994, 66(24): 4390-4399.[9]FRANK A, TANNER S, BAFNA V, et al. Peptide sequence tags for fast database search in mass-spectrometry[J]. Journal of Proteome Research, 2005, 4(4): 1287-1295.[10]KELLER A, PUVINE S, NESVIZHSKII A I, et al. Experimental protein mixture for validating tandem mass spectral analysis[J]. OMICS:A Journal of Integrative Biology, 2002, 6(2): 207-212.[11]BEAUSOLEI S A, VILLN J, GERBER S, et al. A probability-based approach for high-throughput protein phosphorylation analysis and site localization[J]. Nature Biotechnology, 2006,24: 1285-1292. |